Package: tidyttmoment 0.0.5
tidyttmoment: Functional Trait Moment Calculation
Calculates the community four 'moments' (mean, variance, skewness, and kurtosis) of a given trait based on the moments described in Wieczynski et al. (2019) <doi:10.1073/pnas.1813723116>. These functional metrics are extremely useful in characterizing the distribution of traits in a plant community. It also provides tidyverse-friendly wrappers to seamlessly calculate advanced functional diversity indices (e.g., FDis, Rao's Q) using 'fundiversity' (Grenie et al. 2023 <doi:10.1111/ecog.06585>) and functional rarity indices using 'funrar' (Grenie et al. 2017 <doi:10.1111/ddi.12629>). Evaluating these community-weighted moments and diversity metrics allows researchers to evaluate shifts in optimal phenotypes and understand ecological filtering with exactness.
Authors:
tidyttmoment_0.0.5.tar.gz
tidyttmoment_0.0.5.zip(r-4.7)tidyttmoment_0.0.5.zip(r-4.6)tidyttmoment_0.0.5.zip(r-4.5)
tidyttmoment_0.0.5.tgz(r-4.6-any)tidyttmoment_0.0.5.tgz(r-4.5-any)
tidyttmoment_0.0.5.tar.gz(r-4.7-any)tidyttmoment_0.0.5.tar.gz(r-4.6-any)
tidyttmoment_0.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
tidyttmoment/json (API)
| # Install 'tidyttmoment' in R: |
| install.packages('tidyttmoment', repos = c('https://paulesantos.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/paulesantos/tidyttmoment/issues
Last updated from:744c76e2e8. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 137 | ||
| source / vignettes | OK | 163 | ||
| linux-release-x86_64 | OK | 140 | ||
| macos-release-arm64 | OK | 106 | ||
| macos-oldrel-arm64 | OK | 95 | ||
| windows-devel | OK | 84 | ||
| windows-release | OK | 79 | ||
| windows-oldrel | OK | 95 | ||
| wasm-release | OK | 104 |
Exports:tidy_calc_diversitytidy_calc_momenttidy_calc_raritytidy_to_matrices
Dependencies:abindcliclustercodetoolscpp11digestdplyrfundiversityfunrarfuturefuture.applygenericsgeometryglobalsgluelatticelifecyclelinproglistenvlpSolvemagicmagrittrMASSMatrixmgcvnlmeparallellypermutepillarpkgconfigpurrrR6RcppRcppProgressrlangstringistringrtibbletidyrtidyselectutf8vctrsveganwithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate functional diversity indices from tidy data | tidy_calc_diversity |
| Calculate community weighted mean, variance, skewness, and kurtosis | tidy_calc_moment |
| Calculate functional rarity indices from tidy data | tidy_calc_rarity |
| Convert tidy long data to community and trait matrices | tidy_to_matrices |
