Introduction | Key Features | Installation | Core Workflows | 1. Fauna Conservation Status & Common Names | 2. Flora Conservation Status | 3. Automatic Fuzzy Matching for Typos | 4. Direct Filtering by Threat Category | 5. Higher Taxonomy & Dataset Version Metadata | Integration with Tidyverse Workflows | Performance Benchmark | Citation
Package: iucnr 0.0.3
iucnr: Match Species Names to 'IUCN' Red List Data
Facilitates matching species names with the International Union for Conservation of Nature ('IUCN') Red List of Threatened Species data. Streamlines determining conservation statuses and vernacular names through exact and fuzzy taxonomic matching. Designed to support biodiversity research and conservation planning relying on local data from the 'iucnrdata' package.
Authors:
iucnr_0.0.3.tar.gz
iucnr_0.0.3.zip(r-4.7-any)iucnr_0.0.3.zip(r-4.6-any)iucnr_0.0.3.zip(r-4.5-any)
iucnr_0.0.3.tgz(r-4.6-any)iucnr_0.0.3.tgz(r-4.5-any)
iucnr_0.0.3.tar.gz(r-4.7-any)iucnr_0.0.3.tar.gz(r-4.6-any)
iucnr_0.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
iucnr/json (API)
| # Install 'iucnr' in R: |
| install.packages('iucnr', repos = c('https://paulesantos.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/paulesantos/iucnr/issues
Pkgdown/docs site:https://paulesantos.github.io
Datasets:
- iucn_genus - IUCN Genus Database
Last updated from:7739e9eed2. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 143 | ||
| source / vignettes | OK | 219 | ||
| linux-release | OK | 136 | ||
| macos-release | OK | 109 | ||
| macos-oldrel | OK | 96 | ||
| windows-devel | OK | 99 | ||
| windows-release | OK | 87 | ||
| windows-oldrel | OK | 99 | ||
| wasm-release | OK | 104 |
Exports:filter_iucn_genusgenus_exact_matchgenus_fuzzy_matchget_iucn_by_categoryget_iucn_by_taxonomyget_iucn_common_nameget_iucn_statusiucn_data_versioniucn_matchspecies_direct_matchspecies_fuzzy_match
Dependencies:assertthatclicpp11data.tabledplyrfuzzyjoingenericsgeospheregluelifecyclemagrittrpillarpkgconfigpurrrR6Rcpprlangstringdiststringistringrtibbletidyrtidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Filter and Match Genera from a Species List | filter_iucn_genus |
| Exact Genus Match for IUCN Data | genus_exact_match |
| Fuzzy Match Genus Name | genus_fuzzy_match |
| Retrieve IUCN Species Data by Red List Category | get_iucn_by_category |
| Retrieve IUCN Species Data by Taxonomic Hierarchy | get_iucn_by_taxonomy |
| Retrieve Vernacular (Common) Names for Species | get_iucn_common_name |
| Retrieve Conservation Status of Species | get_iucn_status |
| Identify Version of Packaged IUCN Data Snapshot | iucn_data_version |
| IUCN Genus Database | iucn_genus |
| Perform IUCN species matching at genus and species levels | iucn_match |
| Perform direct species matching against IUCN data | species_direct_match |
| Perform fuzzy species matching against IUCN data | species_fuzzy_match |