Package 'ppendemic'

Title: A Glimpse at the Diversity of Peru's Endemic Plants
Description: Introducing a novel and updated database showcasing Peru's endemic plants. This meticulously compiled and revised botanical collection encompasses a remarkable assemblage of over 7,249 distinct species. The data for this resource was sourced from the work of Govaerts, R., Nic Lughadha, E., Black, N. et al., titled 'The World Checklist of Vascular Plants: A continuously updated resource for exploring global plant diversity', published in Sci Data 8, 215 (2021) <doi:10.1038/s41597-021-00997-6>.
Authors: Paul E. Santos Andrade [aut, cre] , Lucely L. Vilca Bustamante [aut]
Maintainer: Paul E. Santos Andrade <[email protected]>
License: MIT + file LICENSE
Version: 0.1.8
Built: 2025-03-13 03:00:45 UTC
Source: https://github.com/paulesantos/ppendemic

Help Index


Check if species are endemic in the ppendemic database

Description

This function checks if a list of species names are endemic in the ppendemic database. The function allows fuzzy matching for species names with a maximum distance threshold to handle potential typos or variations in species names.

Usage

is_ppendemic(splist)

Arguments

splist

A character vector containing the list of species names to be checked for endemic in the ppendemic database.

Value

A character vector indicating if each species is endemic or not endemic.

Examples

is_ppendemic(c("Aa aurantiaca", "Aa aurantiaaia", "Werneria nubigena"))

ppendemic_tab: Endemic Plant Database of Peru

Description

The ppendemic_tab dataset is a tibble (data frame) that provides easy access to a comprehensive database of Peru's endemic plant species. It contains a total of 7,249 records with essential botanical information, including the accepted name, accepted family, accepted name author, publication author, place of publication, volume and page, and first published details.

Usage

ppendemic_tab13

Format

A tibble (data frame) with 7815 rows and 14 columns:

version

Character vector. The version of ppendemic database, same id as POWO database.

version_date

Character vector. The version date of POWO database.

taxon_name

Character vector. The accepted name of the endemic plant species.

taxon_status

Character vector.

family

Character vector. The family of the accepted name of the endemic plant species.

Genus

Character vector.

Species

Character vector.

infraspecific_rank

Character vector.

infraspecies

Character vector.

taxon_authors

Character vector. The author(s) of the accepted name of the endemic plant species.

prinmary_author

Character vector. The author(s) of the publication containing the endemic plant species information.

place_of_publication

Character vector. The place of publication of the endemic plant species information.

volume_and_page

Character vector. The volume and page number of the publication containing the endemic plant species information.

first_published

Character vector. The first published year of the publication containing the endemic plant species information.

Details

The dataset provides a curated and up-to-date collection of Peru's endemic plant species, gathered from reputable botanical sources and publications. The data for this database was extracted and compiled from the World Checklist of Vascular Plants (WCVP) database, which is a comprehensive and reliable repository of botanical information.

Researchers, botanists, ecologists, and nature enthusiasts can use this dataset to explore and study the unique and diverse flora exclusive to Peru. The dataset is particularly valuable for conducting studies related to biodiversity, conservation, and ecological research.

Source

The dataset has been carefully compiled and updated to offer the latest insights into Peru's endemic plant species. Original sources of the data include authoritative botanical publications and research articles available in the WCVP database.

Examples

# Load the package
library(ppendemic)

# Access the dataset
data("ppendemic_tab13")